MEASLES RESURGENCE IN SOUTHERN AFRICA: CHALLENGES TO MEASLESELIMINATION

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On the request of Authors, I am posting this article in full text for colleagues on the African Region. This documentation of trans-boundary spread of measles outbreaks, that affected wide age-groups calls for coordinated actions in regions or regional blocks. Enjoy the reading.

 

ABSTRACT

INTRODUCTION: In seven southern African countries (Botswana, Lesotho, Malawi, Namibia, South Africa, Swaziland and Zimbabwe), following implementation of a measles mortality reduction strategy starting in 1996, the number of annually reported measles cases decreased sharply to less than one per million population during 2006-2008. However, during 2009-2010, large outbreaks occurred in these countries. In 2011, a goal for measles elimination by 2020 was set in the World Health Organization (WHO) African Region (AFR). We reviewed the implementation of the measles control strategy and measles epidemiology during the resurgence in the seven southern African countries.

METHODS: Estimated coverage with routine measles vaccination, supplemental immunization activities (SIA), annually reported measles cases by country, and measles surveillance and laboratory data were analyzed using descriptive analysis.

RESULTS: In the seven countries, coverage with the routine first dose of measles-containing vaccine (MCV1) decreased from 80% to 65% during 1996-2004, then increased to 84% in 2011; during 1996-2011, 79,696,523 people were reached with measles vaccination during 45 SIAs. Annually reported measles cases decreased from 61,160 cases to 60 cases and measles incidence decreased to <1 case per million during 1996-2008. During 2009-2010, large outbreaks that included cases among older children and adults were reported in all seven countries, starting in South Africa and Namibia in mid-2009 and in the other five countries by early 2010. The measles virus genotype detected was predominantly genotype B3.

CONCLUSION: The measles resurgence highlighted challenges to achieving measles elimination in AFR by 2020. To achieve this goal, high two-dose measles vaccine coverage by strengthening routine immunization systems and conducting timely SIAs targeting expanded age groups, potentially including young adults, and maintaining outbreak preparedness to rapidly respond to outbreaks will be needed.

Authors: Messeret E. Shibeshi, Balcha G. Masresha, Sheilagh B. Smit, Robin J. Biellik, Jennifer L. Nicholson, Charles Muitherero, Nestor Shivute, Oladapo Walker, Katsande Reggis, James L. Goodson.

Author Affiliations (not included)

Full text Article

1. Introduction

Measles caused an estimated 2.6 million deaths worldwide in1980 [1]. Following widespread use of measles vaccine, estimatedmeasles deaths decreased globally to 158,000 in 2011 [2]. In 2012, the World Health Organization (WHO) Global Vaccine Action Plan (GVAP) set a goal for measles elimination in five of the six WHOregions by 2020 [3]. In September, 2013 the WHO South-East AsiaRegion adopted a measles elimination goal by 2020; therefore, for the first time, all six WHO regions have a goal for measles elimination by 2020 or earlier [4].

During the early 1990s, the WHO Region of the Americas (ROA) pioneered a measles elimination strategy that included (1) an initial one-time nationwide catch-up supplemental immunizationactivity (SIA) targeting children nine months to 14 years of age, (2) keep-up measles vaccination through routine immunization of successive birth cohorts, (3) periodic follow-up SIAs targeting children born since the initial SIA to prevent accumulation of susceptible individuals, and (4) establishing case-based measles surveillance [5]. The ROA goal of measles elimination, established in 1994, was achieved by 2002 [6]. In 2003, ROA countries adopted a goal for rubella elimination by 2010 and started implementing large, one-time speed-up SIAs using combined measles-rubella-containing (MR) vaccine targeting children and adults, generally up to 29 or 39 years of age [7]. The last endemic rubella case was reported in 2009 [8]. The added benefit of combined MR SIAs was that adults who remained measles-susceptible were vaccinated, thus reducing the accumulation of measles-susceptible persons [9].

In 1996, seven southern African countries (Botswana, Lesotho,Malawi, Namibia, South Africa, Swaziland, and Zimbabwe) with relatively high (∼80%) MCV1 coverage in the WHO African Region(AFR) started implementing a measles mortality reduction strategy that was adapted from the ROA strategy [10]. During 1996–2000 in these seven countries, a nationwide catch-up measles SIA targeting children nine months to 14 years of age was completed, annually reported measles cases decreased from 61,160 to 7,057and reported measles deaths decreased to zero [10,11].

In 2001, based on the success in these seven countries, all 46 WHO-AFR countries became part of a global initiative to reduce estimated measles mortality by 50% by 2005, compared with the 1999 estimate [12]. The WHO-UNICEF recommended measles mortality reduction strategies included (1) first dose of measles-containing vaccine through routine services (MCV1) for children at nine months of age, (2) a one-time nationwide catch-up SIA targeting children nine months to 14 years of age and periodic follow-up SIAs targeting children 9–59 months of age, (3) measles case-based surveillance with laboratory testing, and (4) improved measles case management [13]. Additionally, in 2010 the World Health Assembly established the following WHO-recommendedtargets to measure progress towards measles eradication: (1) reduce annual measles incidence to <1 laboratory-confirmed or epidemiologically-linked case per million and maintain that level; (2) >95% coverage annually of both MCV1 and a second dose ofmeasles-containing vaccine (MCV2) both nationally and in every district or equivalent administrative unit [14,15].

During 2000–2008, in AFR, reported measles cases decreased 93% and estimated measles deaths decreased 92% from 371,000 to 28,000 [16]. However, measles-susceptible persons accumulated over a prolonged time period with sub optimal vaccination coverage, and during 2009–2010, confirmed measles outbreaks occurred in 28 AFR countries, including the seven southern African countries  that started SIA implementation in 1996. In 2011, AFR countries adopted a goal for measles elimination by 2020 [17]. To inform AFR measles elimination efforts and identify likely causes of the measles resurgence, measles vaccination, epidemiological and laboratory surveillance data in the seven southern African countries from 1996 to 2011 were analyzed.

2. Methods

2.1. Routine immunization

WHO/UNICEF MCV1 coverage estimates for children aged one year and MCV2 coverage estimates reported by countries using theWHO/UNICEF joint reporting form (JRF) were analyzed [11].

2.2. Supplemental immunization activities

SIA administrative coverage, calculated by dividing the number of children vaccinated by the number of children targeted for vaccination, reported by each country to WHO were reviewed.

2.3. Measles surveillance

Annual measles cases reported by each country using the JRF during 1996–2011 and national measles case-based surveillancedata reported by each country to WHO during 2009–2011 were analyzed [11]. JRF-reported cases were classified as suspected cases for analysis, since these data were either from case-based surveillance or the Integrated Disease Surveillance and Response system of aggregate numbers of suspected measles cases [18]. For surveillance, the suspected measles case definition used was an illness characterized by maculopapular rash, fever and ≥1 ofthe following symptoms: conjunctivitis, coryza, and cough, orany patient in whom the clinician suspects measles. Investigations of suspected cases included collection of information on sex, place of residence (urban/rural), age, vaccination status, and collection of a serum specimen for laboratory testing. Accordingto WHO-AFR guidelines, suspected measles cases were classified as confirmed by laboratory, epidemiologic linkage and/or clinical criteria. Laboratory-confirmed measles cases were defined as having measles-specific immunoglobulin M (IgM) antibody positive test result, and not receiving a measles vaccination during the 30 days prior to rash onset. An epidemiologically-linked case was defined based on WHO-AFR guidelines as meeting the suspected measles case definition and having contact (i.e., lived in the same district or adjacent districts with plausibility of transmission) with a laboratory-confirmed measles case with rash onset within the preceding 30 days. A clinically-compatible case was defined as meeting the measles case definition, and with no sample availablefor laboratory testing and no evidence of epidemiological linkage to a laboratory-confirmed case.

Data were analyzed using SAS version 9.3 (SAS Institute). Testing for measles-specific IgM antibody was performed at national measles laboratories using a standard enzyme-linked immunosorbant assay (Enzygnost ELISATM, Siemens, Marburg, Germany). RNA was extracted from available specimens using the QIAamp® viralRNA mini kit (QIAGEN®), and amplified by RT-PCR using primers MeV214 and MeV216 designed to target a 634 nucleotide regioncoding for the 3-terminus of the nucleoprotein (N) gene (measlesgenotyping kit v2.0 CDC, Atlanta). Sequences were analyzed using Sequencher software (Gene Codes Corporation 4.1.4, Ann Arbor,MI) and phylogenetic and molecular evolutionary analyses were conducted using MEGA version 5 software using the maximum likelihood algorithm with bootstrap test of phylogeny relative to WHOmeasles virus reference strains [19].

3. Results

3.1. Routine immunization

During 1996–2011, MCV1 was recommended to be admin-istered at nine months of age. MCV2 though routine servicesat 18 months of age was introduced in South Africa in 2000,Lesotho in 2001, Swaziland in 2002, and Botswana in 2011. During1996–2011, WHO/UNICEF MCV1 coverage estimates increased inall seven countries, with absolute increases ranging from 2% inSouth Africa to 16% in Swaziland (Table 1). In 2011, MCV1 cov-erage estimates ranged from 74% in Namibia to 98% in Swaziland.The weighted average of MCV1 coverage estimates in the sevencountries decreased from 80% to 65% during 1996–2004, thenincreased to 84% in 2011 (Fig. 1).Reports of MCV2 coverage began in South Africa in 2000, Lesothoin 2001, and Swaziland in 2002; the most recent available reporteddata for MCV2 coverage was 70% for Lesotho in 2009, 83% forSouth Africa in 2010, and 74% for Swaziland in 2010. In BotswanaMCV2 was introduced in 2011; however, no reported coverage datawas available. By 2012, MCV2 had not been introduced in Malawi,Namibia or Zimbabwe.

3.2. Supplemental immunization activities

During 1996–2011, 45 nationwide or sub-national follow-upSIAs were implemented, including five each in Botswana, Lesotho,and Malawi, six each in Namibia, Swaziland, and Zimbabwe, and 12 in South Africa (Table not included). During the 45 SIAs, a total of 79,696,523 people received measles vaccination and reported coverage was ≥95% in 15 SIAs (34%), 90–94% in 13 SIAs (30%), 80–89% in 12 SIAs (27%), and <80% in four SIAs (9%) (Table Not shown).

3.3. Measles surveillance

From 1996 to 1999, the number of annually reported measles cases from the WHO/UNICEF JRF in the seven countries decreased 95%, from 61,160 to 2,988 (Figure not shown). The number of reported cases in 2000 increased to 7,057 due to an increase in reported cases from Botswana and South Africa. During 2001–2008, the number of annually reported measles cases decreased 98%, from 2,528 to 60 and measles incidence decreased 98% from 33 cases per million to <1 case per million, with all seven countries reporting decreases incases and incidence.

During 2001–2004, isolated outbreaks occurred; the number ofJRF-reported suspected measles cases was 1,166 in 2001 and 1,043 in 2002 from South Africa, 1,278 in 2002 from Namibia, and 1,116 from Malawi in 2004. During 2006–2008, between zero and 242 suspected measles cases were reported annually through the JRF from each of the seven countries. However, during 2009–2010, large outbreaks were reported in all seven countries. Starting in epidemiologic week (epi-week) 24 of 2009, clusters of confirmed cases were reported in South Africa, primarily from the Tshwane and Johannesburg municipal districts in Gauteng Province (Figs. 2 and 3 not shown).

Reported confirmed cases increased sharply starting in epi-week 35 in South Africa, and peaked with 674 cases in epi-week40. The outbreak in South Africa coincided with an increase in con-firmed cases in Namibia starting in epi-week 31, 2009 (Fig. 2 not shown). In July–December 2009 in Namibia, confirmed measles incidence ≥50cases per million was reported in 21 districts in northern Namibia and along the Angola border, including Opuwo district with the highest confirmed measles incidence, 12,454 cases per million(Fig. 3 not shown). Increases in confirmed cases started in Botswana, Malawi, and Zimbabwe by epi-week one, 2010 and in Lesotho and Swaziland by epi-week five, 2010 (Fig. 2 not shown). Weekly reported confirmed cases reached peaks of 107 cases in epi-week six in Botswana, 209 cases in epi-week 11 in Lesotho, 555 cases in epi-week 16 in Zimbabwe,42 cases in epi-week 23 in Swaziland, and 6,869 cases in epi-week25 in Malawi. After January 2011, sporadic cases occurred in all seven countries.

During 2009–2011, through measles case-based surveillancein the seven countries, 181,826 suspected measles cases werereported (Table 2 nott shown). Of these, 51,700 (28%) had a specimen sent for laboratory testing to detect measles-specific IgM; 21,265 (41%) tested positive, 28,691 (55%) tested negative, 891 (2%) had indeterminate test results, and 853 (2%) had unknown test results(Table 2 not shown). During 2009–2011, 144,580 confirmed cases were reported from the seven countries (Table 3); of these, 21,265(15%) were laboratory-confirmed, 115,767 (80%) were confirmed by epidemiological link, and 7,548 (5%) were confirmed by clinicallycompatible classification (data not shown). Malawi accounted for108,717 (75%) confirmed cases. In six of the seven countries (all except Namibia), measles incidence peaked in 2010, ranging from 237 cases per million population in South Africa to 7,293 cases per million population in Malawi (Table 3 not shown).

Of 144,580 confirmed cases reported during 2009–2011, 14,910(10%) had information on residence; of these, 8407 (56%) were from urban settings (Table 3 not shown). The proportion of reported cases from an urban setting was highest in 2009 in Namibia (94%) and in 2010 in Zimbabwe (58%). Of the 141,937 (98%) cases with age informa tion, 38,418 (27%) were adults ≥15 years of age (Table 3 not shown); of these14,065 (37%) were 15–19 years, 7981 (21%) were 20–24 years, 7474 (19%) were 25–29 years, and 8,898 (23%) were ≥30 years of age. Information about vaccination status was missing for 134,248 (93%)confirmed cases. However, of the 10,332 (7%) confirmed cases with vaccination history, 7985 (77%) were unvaccinated for measles (Table 3 not shown).

During 2009–2011, genotype data were available for 282 reported cases: two from Swaziland, 16 from Lesotho, 16 from Botswana, 25 from Malawi, 34 from Zimbabwe, 64 from Namibia,and 125 from South Africa (Fig. 3 and Supplemental Fig. 1 not shown). Of the 282 genotype results, 229 (81%) were B3, 51 (18%) were B2, one(<1%) was D4, and one (<1%) was D8. The genotype B3 viruses were of a single strain detected in all seven countries and found to be closely related to measles virus previously detected in West Africa; in Namibia, the genotype B2 strain was found to be closely related to measles virus previously detected in Angola and the DemocraticRepublic of the Congo. The genotype D8 was detected in 2009 and the genotype D4 was detected in 2010, both in South Africa.

4. Discussion

Following intensive efforts to control measles in southern Africa starting in 1996, reported measles incidence was reduced to <1per million population in Botswana, Lesotho, Malawi, Namibia,South Africa, Swaziland and Zimbabwe during 2006–2008. Thereafter, these seven countries experienced large outbreaks, starting in2009 in South Africa and Namibia before spreading to neighboring countries, predominantly with a single strain of measles virus geno-type B3 previously detected in West Africa. Of confirmed measles cases during the resurgence, 16% were among infants <9 months of age and 27% among adults.

Outbreak investigations conducted during the resurgence determined that the principal cause of these outbreaks was failureto vaccinate eligible persons, causing measles-susceptibility that accumulated over a prolonged time period [20–27]. During the past decade, the significant reduction in measles burden likely led to complacency in measles vaccination efforts, including SIA planning and implementation and routine immunization services. Additionally, suboptimal vaccination coverage contributed to out-breaks among known at-risk sub populations, for example, the nomadic populations in Namibia, and the apostolic religious communities reluctant to accept vaccinations for faith-based reasons in Zimbabwe, Malawi, Botswana, Swaziland and South Africa[28]. Measles outbreak response immunization (ORI) activitiesconducted during the resurgence included ‘selective’ vaccinationof unvaccinated children 6–59 months of age at routine servicesand ‘non-selective’ mass campaigns targeting age groups rangingfrom 6–59 months to ≥6 months of age. Following ORI, casesdecreased; however, ORI implementation generally was not rapidand occurred months after the start of outbreaks.

In some settings, immunization program data were found to be unreliable for guiding vaccination efforts. For example, in South Africa, during 2005–2011, reported MCV1 coverage ranged from83% to 99% while WHO/UNICEF estimates that incorporate available survey results ranged from 63% to 78% [29,30]. In the seven countries prior to the resurgence, reported SIA administrativecoverage estimates were high; however post-SIA coverage surveys were not routinely conducted to validate reported coverageand outbreaks occurred among children in SIA target age groups,suggesting suboptimal SIA coverage and inaccuracies in reported coverage.

These findings should be considered with several limitations. First, reported vaccination coverage data may be biased by inaccurate estimates of target populations and reporting of doses delivered. Second, surveillance systems do not detect all measles cases because reporting is incomplete from communities and health facilities. Third, although adequate case investigation is recommended for >80% of suspected cases, 90% and 93% of the cases had missing information for urban/rural and vaccination status, respectively. Therefore, analysis of residence and vaccination status might not be representative of all cases. Finally, comparing annual reported measles case totals and incidence is difficult when sensitivity and completeness of reporting vary by country and by year.The 2010 World Cup soccer games hosted by South Africa during June–July, 2010, coincided with the peak of the measles outbreakin that country, resulting in infection of susceptible visitors and subsequent exportation of measles virus to several countries. Ingeneral, the Southern Africa economic block has a relatively high volume of cross-border movement by traders, business people, students, tourists and migrant workers; international migration and travel provide opportunities for measles virus importations [31]. In countries that share open borders and frequent migration, coordinated vaccination strategies, including synchronized SIAs prior tolarge public gatherings, e.g. international sporting events, could beconsidered to prevent outbreaks.

Optimal ORI strategies, including timing, geographic scope, and target age groups are uncertain and remain a global research priority [32]. Infants born with transferred maternal antibodies from vaccine-induced protection rather than from naturally acquired measles virus infection generally result in lower geometric mean titers that wane faster, leaving the infant unprotected in early infancy [33,34]. Also, children born to HIV-infected mothers have lower concentrations of passively acquired maternal antibodies[35,36], and measles antibody titers decline more rapidly after vaccination among HIV-infected compared with non-HIV infectedpersons [36–38]. Therefore, WHO recommends ORI target age groups include young infants starting at 6 months of age, and inareas with high incidence of both HIV infection and measles, thefirst dose of measles vaccine may be offered as early as 6 monthsof age, in addition to the routine two-dose schedule [39].

The relative contribution of HIV infection to measles virustransmission in southern Africa appears to have been minimal [27,40,41]. In 2002 in South Africa and during 2009–2011 in SouthAfrica and Malawi, investigations determined the outbreaks were caused primarily by sub optimal vaccination coverage and that high HIV-prevalence played a minor role in the accumulationof measles-susceptible persons [40,42]. Moreover, Biellik et al. reported in 2002 that measles was nearly eliminated in thesecountries despite high HIV prevalence [10].

To achieve measles elimination, high population immunity is needed and WHO recommends >95% two-dose measles vaccination coverage at the national and district levels as a measure to monitor progress toward measles elimination [14]. To achieve high coverage, routine outreach services to communities known to be measles-susceptible or with poor access to immunization services are needed. Additionally, these communities should be included in SIA micro-planning and SIA planning should start 6–8 month sprior to implementation [43]. The shift of measles epidemiology towards older age groups is well documented [44]; therefore, adequate resources should be made available to ensure timely SIA implementation, and if indicated, using expanded target age groups [14,39,45].

Measles and rubella elimination strategies, including using MR vaccine, were effectively integrated in the ROA, leading to elimination of both measles and rubella. However, in AFR, by the start of 2013, MR vaccine was not publicly available in 43 of the 46countries and rubella virus circulated widely [46]. In 2012, the GAVI Alliance committed funding for eligible countries to introduce rubella-containing vaccine starting with a one-time MR SIA targeting children nine months to 14 years of age. But, unlike the speed-up MR SIAs in ROA that started within ten years after initial measles SIAs and included adults, MR SIAs in AFR will start >17 years after initial measles SIAs and will not include adults; therefore, existing measles susceptibility among adults will remain,increasing the need for high population immunity among infants and children needed to achieve elimination.

The Measles & Rubella Initiative 2012–2020 Global Measles and Rubella Strategic Plan, with goals aligned to the GVAP, aims to (i) achieve and maintain high levels of population immunity through high coverage with two doses of MR vaccines, (ii) establish effective surveillance to monitor disease and evaluate progress, (iii) develop and maintain outbreak preparedness for rapid response and appropriate case management, (iv) communicate and engage to build public confidence in and demand for vaccination, and (v) conduct research and development to support operations and improve vaccination and diagnostic tools [47]. To implement these strategies and improve data quality for guiding program efforts, adequate resources and intensified efforts are needed to achieve measles elimination in AFR by 2020.

Conflicts of interest

We declare that we have no conflict of interest.

The findings and conclusions in this report are those of the authors and do not necessarily represent the official position of the World Health Organization or the U.S. Centers for Disease Control and Prevention.

Authors declare that this article has not been previously pre-sented.

Financial interest: The authors do not have a financial or proprietary interest in a product, method, or material or lack thereof.

Acknowledgements:

The authors gratefully acknowledge the work of all immunization officers, surveillance medical officers, and measles laboratory personnel across AFR involved in the implementation of the strategies for measles control. We also thank the Measles & Rubella Initiative for providing financial and technical assistance to member states for strategy implementation and efforts to achievemeasles elimination in AFR.

Contributions. MES, BGM, JLN, SS, CM, NS, OW, KR, RJB and JLG designed the study. MES, BGM, SS, CM, NS, OW, and KR participatedin data collection. MES, BGM, JLN, SS, CM, NS, OW, KR, RJB and JLG participated in data analysis and interpretation. MES, BGM, JLN, SS,RJB and JLG wrote the report. All authors reviewed and approved the final report.

Appendix A. Supplementary data

Supplementary data associated with this article can befound, in the online version, at http://dx.doi.org/10.1016/j.vaccine.2014.01.089.

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